Transcript: ENST00000290585.4 CELF3-002

Description

CUGBP, Elav-like family member 3 [Source:HGNC Symbol;Acc:11967]

Gene Synonyms

BRUNOL1, CAGH4, ERDA4, MGC57297, TNRC4

Location

Chromosome 1: 151,674,880-151,688,528 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 18 domains and features, is associated with 6408 variant alleles and maps to 655 oligo probes.

Gene

This transcript is a product of gene ENSG00000159409.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000290583.4	CELF3-001	3246	465aa	ENSP00000290583.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1002	Q5SZQ8 Q8IZ97	NM_007185.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000420342.1	CELF3-003	2444	466aa	ENSP00000402503.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000290585.4	CELF3-002	2335	415aa	ENSP00000290585.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53367	Q5SZQ8 Q8IZ97	NM_001172649.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392706.3	CELF3-201	1330	260aa	ENSP00000376470.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DQL3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000470688.1	CELF3-004	2970	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478829.1	CELF3-007	733	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479893.1	CELF3-005	731	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000419910.2	CELF3-006	684	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 2,335 bps, Translation length: 415 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5SZQ8

CCDS

This transcript is a member of the Human CCDS set: CCDS53367

Version

ENST00000290585.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000036664 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000290585.4 CELF3-002

Summary