Transcript: ENST00000478571.1 C1orf27-003

Description

chromosome 1 open reading frame 27 [Source:HGNC Symbol;Acc:24299]

Gene Synonyms

FLJ20505, ODR4, TTG1, odr-4

Location

Chromosome 1: 186,367,552-186,381,025 forward strand.

About this transcript

This transcript has 4 exons, is associated with 6309 variant alleles and maps to 110 oligo probes.

Gene

This transcript is a product of gene ENSG00000157181.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000287859.6	C1orf27-001	3792	454aa	ENSP00000287859.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53448	Q5SWX8	NM_017847.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367470.3	C1orf27-201	3823	431aa	ENSP00000356440.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53449	Q5SWX8	NM_001164245.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419367.3	C1orf27-004	1915	422aa	ENSP00000395084.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53450	Q5SWX8	NM_001164246.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000432021.3	C1orf27-005	1296	431aa	ENSP00000402029.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53449	Q5SWX8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000461662.1	C1orf27-002	503	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478571.1	C1orf27-003	382	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 382 bps,

Version

ENST00000478571.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000100316 (version 1)

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Transcript: ENST00000478571.1 C1orf27-003

Summary