Transcript: ENST00000531219.1 PAMR1-006

Description

peptidase domain containing associated with muscle regeneration 1 [Source:HGNC Symbol;Acc:24554]

Gene Synonyms

DKFZP586H2123, RAMP

Location

Chromosome 11: 35,456,116-35,457,773 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 854 variant alleles and maps to 42 oligo probes.

Gene

This transcript is a product of gene ENSG00000149090.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000378880.2	PAMR1-001	3143	720aa	ENSP00000368158.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31460	E9PIV1 Q6UXH9	NM_001001991.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000532848.1	PAMR1-003	2843	680aa	ENSP00000433868.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60759	E9PIV1	NM_001282675.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000278360.3	PAMR1-002	2786	737aa	ENSP00000278360.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7898	E9PQ70 Q6UXH9	NM_015430.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000527605.1	PAMR1-005	2402	675aa	ENSP00000432591.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PQ70	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000378878.3	PAMR1-201	2374	609aa	ENSP00000368156.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60760	A8MQ58 E9PMN5	NM_001282676.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529303.1	PAMR1-007	551	177aa	ENSP00000433024.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PMN5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000534803.1	PAMR1-004	952	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000531219.1	PAMR1-006	560	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 560 bps,

Version

ENST00000531219.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000389180 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000531219.1 PAMR1-006

Summary