Transcript: ENST00000276390.2 ATP6V1B2-001

Description

ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2 [Source:HGNC Symbol;Acc:854]

Gene Synonyms

ATP6B1B2, ATP6B2, HO57, VATB, VPP3, Vma2

Location

About this transcript

This transcript has 14 exons, is annotated with 10 domains and features, is associated with 11881 variant alleles and maps to 557 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000276390.2	ATP6V1B2-001	2875	511aa	ENSP00000276390.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6014	B4DFM5 B4DQI9 P21281	NM_001693.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000519667.1	ATP6V1B2-005	670	199aa	ENSP00000430682.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000521442.1	ATP6V1B2-007	738	49aa	ENSP00000430866.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000520830.1	ATP6V1B2-004	649	56aa	ENSP00000428069.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000523478.1	ATP6V1B2-006	572	66aa	ENSP00000430154.1	Nonsense mediated decay		E5RGH6	-	-
ENST00000523482.1	ATP6V1B2-003	6907	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 2,875 bps, Translation length: 511 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P21281

CCDS

This transcript is a member of the Human CCDS set: CCDS6014

Version

ENST00000276390.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000253732 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.