Transcript: ENST00000468970.1 ARNT-005

Description

aryl hydrocarbon receptor nuclear translocator [Source:HGNC Symbol;Acc:700]

Gene Synonyms

BHLHE2, HIF-1-beta, HIF-1beta, HIF1-beta, HIF1B, HIF1BETA, TANGO, bHLHe2

Location

Chromosome 1: 150,803,962-150,808,975 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 1900 variant alleles and maps to 159 oligo probes.

Gene

This transcript is a product of gene ENSG00000143437.16 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000358595.5	ARNT-001	4887	789aa	ENSP00000351407.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS970	P27540	NM_178427.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000354396.2	ARNT-010	3538	787aa	ENSP00000346372.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS65642	F8WAP6 Q59ED4	NM_001286036.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000515192.1	ARNT-006	2892	775aa	ENSP00000423851.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS65641	P27540	NM_001286035.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000505755.1	ARNT-009	2427	774aa	ENSP00000427571.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS971	P27540	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000471844.2	ARNT-007	3703	416aa	ENSP00000425899.1	Nonsense mediated decay		A6NGV6	-	-
ENST00000504358.1	ARNT-012	571	55aa	ENSP00000425363.1	Nonsense mediated decay		D6RDB3	-	-
ENST00000468970.1	ARNT-005	807	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497108.2	ARNT-014	546	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478972.2	ARNT-004	597	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000505979.1	ARNT-013	570	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000510273.1	ARNT-016	562	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000512296.1	ARNT-015	550	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 807 bps,

Version

ENST00000468970.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000084745 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000468970.1 ARNT-005

Summary