Transcript: ENST00000358595.5 ARNT-001

Description

aryl hydrocarbon receptor nuclear translocator [Source:HGNC Symbol;Acc:700]

Gene Synonyms

BHLHE2, HIF-1-beta, HIF-1beta, HIF1-beta, HIF1B, HIF1BETA, TANGO, bHLHe2

Location

Chromosome 1: 150,782,181-150,849,244 reverse strand.

About this transcript

This transcript has 22 exons, is annotated with 39 domains and features, is associated with 28332 variant alleles and maps to 1084 oligo probes.

Gene

This transcript is a product of gene ENSG00000143437.16 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000358595.5	ARNT-001	4887	789aa	ENSP00000351407.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS970	P27540	NM_178427.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000354396.2	ARNT-010	3538	787aa	ENSP00000346372.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS65642	F8WAP6 Q59ED4	NM_001286036.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000515192.1	ARNT-006	2892	775aa	ENSP00000423851.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS65641	P27540	NM_001286035.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000505755.1	ARNT-009	2427	774aa	ENSP00000427571.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS971	P27540	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000471844.2	ARNT-007	3703	416aa	ENSP00000425899.1	Nonsense mediated decay		A6NGV6	-	-
ENST00000504358.1	ARNT-012	571	55aa	ENSP00000425363.1	Nonsense mediated decay		D6RDB3	-	-
ENST00000468970.1	ARNT-005	807	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497108.2	ARNT-014	546	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478972.2	ARNT-004	597	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000505979.1	ARNT-013	570	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000510273.1	ARNT-016	562	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000512296.1	ARNT-015	550	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 22, Coding exons: 22, Transcript length: 4,887 bps, Translation length: 789 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P27540

CCDS

This transcript is a member of the Human CCDS set: CCDS970

Version

ENST00000358595.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000084741 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000358595.5 ARNT-001

Summary