Transcript: ENST00000590387.1 C18orf8-009

Description

chromosome 18 open reading frame 8 [Source:HGNC Symbol;Acc:24326]

Gene Synonyms

HsT2591, MIC-1, MIC1, Mic-1

Location

Chromosome 18: 21,107,838-21,109,446 forward strand.

About this transcript

This transcript has 2 exons, is associated with 799 variant alleles and maps to 130 oligo probes.

Gene

This transcript is a product of gene ENSG00000141452.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000269221.3	C18orf8-001	2162	657aa	ENSP00000269221.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32803	Q96DM3	NM_013326.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000590868.1	C18orf8-004	2002	609aa	ENSP00000467007.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ENL9	NM_001276342.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000592119.1	C18orf8-006	565	160aa	ENSP00000465696.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EKN1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000590870.1	C18orf8-002	2102	333aa	ENSP00000464875.1	Nonsense mediated decay		K7EIS6	-	-
ENST00000589215.1	C18orf8-003	1945	85aa	ENSP00000467852.1	Nonsense mediated decay		K7EQJ3	-	-
ENST00000589860.1	C18orf8-008	787	66aa	ENSP00000465956.1	Nonsense mediated decay		K7EL80	-	-
ENST00000587690.1	C18orf8-005	660	154aa	ENSP00000467692.1	Nonsense mediated decay		K7EQ65	-	-
ENST00000591367.1	C18orf8-013	721	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000589409.1	C18orf8-010	706	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000593081.1	C18orf8-012	675	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000587153.1	C18orf8-007	554	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000592682.1	C18orf8-011	387	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000590387.1	C18orf8-009	332	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 332 bps,

Version

ENST00000590387.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000445394 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000590387.1 C18orf8-009

Summary