Transcript: ENST00000269221.3 C18orf8-001

Description

chromosome 18 open reading frame 8 [Source:HGNC Symbol;Acc:24326]

Gene Synonyms

HsT2591, MIC-1, MIC1, Mic-1

Location

Chromosome 18: 21,083,473-21,111,746 forward strand.

About this transcript

This transcript has 20 exons, is annotated with 5 domains and features, is associated with 13423 variant alleles and maps to 617 oligo probes.

Gene

This transcript is a product of gene ENSG00000141452.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000269221.3	C18orf8-001	2162	657aa	ENSP00000269221.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32803	Q96DM3	NM_013326.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000590868.1	C18orf8-004	2002	609aa	ENSP00000467007.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ENL9	NM_001276342.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000592119.1	C18orf8-006	565	160aa	ENSP00000465696.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EKN1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000590870.1	C18orf8-002	2102	333aa	ENSP00000464875.1	Nonsense mediated decay		K7EIS6	-	-
ENST00000589215.1	C18orf8-003	1945	85aa	ENSP00000467852.1	Nonsense mediated decay		K7EQJ3	-	-
ENST00000589860.1	C18orf8-008	787	66aa	ENSP00000465956.1	Nonsense mediated decay		K7EL80	-	-
ENST00000587690.1	C18orf8-005	660	154aa	ENSP00000467692.1	Nonsense mediated decay		K7EQ65	-	-
ENST00000591367.1	C18orf8-013	721	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000589409.1	C18orf8-010	706	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000593081.1	C18orf8-012	675	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000587153.1	C18orf8-007	554	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000592682.1	C18orf8-011	387	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000590387.1	C18orf8-009	332	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 2,162 bps, Translation length: 657 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96DM3

CCDS

This transcript is a member of the Human CCDS set: CCDS32803

Version

ENST00000269221.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000445386 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000269221.3 C18orf8-001

Summary