Transcript: ENST00000485307.1 SLC22A23-007

Description

solute carrier family 22, member 23 [Source:HGNC Symbol;Acc:21106]

Gene Synonyms

C6orf85, FLJ22174

Location

Chromosome 6: 3,283,699-3,456,277 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 18 domains and features, is associated with 74001 variant alleles and maps to 220 oligo probes.

Gene

This transcript is a product of gene ENSG00000137266.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000436008.2	SLC22A23-002	6641	694aa	ENSP00000410245.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J4Z0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000406686.3	SLC22A23-006	5658	686aa	ENSP00000385028.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47363	A1A5C7	NM_015482.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380302.4	SLC22A23-009	2883	405aa	ENSP00000369657.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34331	A1A5C7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000490273.1	SLC22A23-005	2043	405aa	ENSP00000419463.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34331	A1A5C7	NM_021945.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000485307.1	SLC22A23-007	1574	440aa	ENSP00000418134.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C4T9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000380298.2	SLC22A23-001	1574	361aa	ENSP00000369653.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A1A5C7	NM_001286456.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467177.1	SLC22A23-010	1221	386aa	ENSP00000418985.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9IZW5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000497691.1	SLC22A23-008	2555	92aa	ENSP00000417737.1	Nonsense mediated decay		F8WBC7	-	-
ENST00000433689.2	SLC22A23-004	730	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496753.1	SLC22A23-011	561	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467144.1	SLC22A23-012	542	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482874.1	SLC22A23-013	622	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,574 bps, Translation length: 440 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000485307.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000353083 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000485307.1 SLC22A23-007

Summary