Transcript: ENST00000380302.4 SLC22A23-009

Description

solute carrier family 22, member 23 [Source:HGNC Symbol;Acc:21106]

Gene Synonyms

C6orf85, FLJ22174

Location

Chromosome 6: 3,272,008-3,445,247 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 18 domains and features, is associated with 75249 variant alleles and maps to 511 oligo probes.

Gene

This transcript is a product of gene ENSG00000137266.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000436008.2	SLC22A23-002	6641	694aa	ENSP00000410245.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J4Z0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000406686.3	SLC22A23-006	5658	686aa	ENSP00000385028.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47363	A1A5C7	NM_015482.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380302.4	SLC22A23-009	2883	405aa	ENSP00000369657.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34331	A1A5C7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000490273.1	SLC22A23-005	2043	405aa	ENSP00000419463.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34331	A1A5C7	NM_021945.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000485307.1	SLC22A23-007	1574	440aa	ENSP00000418134.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C4T9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000380298.2	SLC22A23-001	1574	361aa	ENSP00000369653.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A1A5C7	NM_001286456.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467177.1	SLC22A23-010	1221	386aa	ENSP00000418985.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9IZW5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000497691.1	SLC22A23-008	2555	92aa	ENSP00000417737.1	Nonsense mediated decay		F8WBC7	-	-
ENST00000433689.2	SLC22A23-004	730	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496753.1	SLC22A23-011	561	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467144.1	SLC22A23-012	542	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482874.1	SLC22A23-013	622	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 8, Transcript length: 2,883 bps, Translation length: 405 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A1A5C7

CCDS

This transcript is a member of the Human CCDS set: CCDS34331

Version

ENST00000380302.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000353085 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000380302.4 SLC22A23-009

Summary