Transcript: ENST00000373555.4 GOLGA1-001

Description

golgin A1 [Source:HGNC Symbol;Acc:4424]

Gene Synonyms

MGC33154, golgin-97

Location

About this transcript

This transcript has 23 exons, is annotated with 22 domains and features, is associated with 27316 variant alleles and maps to 829 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000373555.4	GOLGA1-001	4801	767aa	ENSP00000362656.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6860	Q5T165 Q92805	NM_002077.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000421514.1	GOLGA1-005	589	112aa	ENSP00000396966.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T165	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000475407.1	GOLGA1-003	4107	168aa	ENSP00000473648.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000485337.1	GOLGA1-002	935	151aa	ENSP00000435006.1	Nonsense mediated decay		H0YE54	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000605438.1	GOLGA1-009	886	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000373551.4	GOLGA1-004	522	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 23, Coding exons: 21, Transcript length: 4,801 bps, Translation length: 767 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q92805

CCDS

This transcript is a member of the Human CCDS set: CCDS6860

Version

ENST00000373555.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000054049 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.