Transcript: ENST00000373551.4 GOLGA1-004

Description

golgin A1 [Source:HGNC Symbol;Acc:4424]

Gene Synonyms

MGC33154, golgin-97

Location

About this transcript

This transcript has 3 exons, is associated with 5186 variant alleles and maps to 118 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000373555.4	GOLGA1-001	4801	767aa	ENSP00000362656.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6860	Q5T165 Q92805	NM_002077.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000421514.1	GOLGA1-005	589	112aa	ENSP00000396966.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T165	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000475407.1	GOLGA1-003	4107	168aa	ENSP00000473648.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000485337.1	GOLGA1-002	935	151aa	ENSP00000435006.1	Nonsense mediated decay		H0YE54	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000605438.1	GOLGA1-009	886	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000373551.4	GOLGA1-004	522	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 522 bps,

Version

ENST00000373551.4

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000054052 (version 1)