Transcript: ENST00000552386.1 RBM19-005

Description

RNA binding motif protein 19 [Source:HGNC Symbol;Acc:29098]

Gene Synonyms

DKFZp586F1023, KIAA0682

Location

Chromosome 12: 114,352,774-114,365,236 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 5318 variant alleles and maps to 107 oligo probes.

Gene

This transcript is a product of gene ENSG00000122965.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000545145.2	RBM19-003	4422	960aa	ENSP00000442053.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9172	Q9Y4C8	NM_001146699.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000261741.5	RBM19-001	4194	960aa	ENSP00000261741.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9172	Q9Y4C8	NM_016196.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392561.3	RBM19-002	3571	960aa	ENSP00000376344.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9172	Q9Y4C8	NM_001146698.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000552384.1	RBM19-006	588	110aa	ENSP00000449604.1	Nonsense mediated decay		H0YIL2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000553232.1	RBM19-007	1265	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000546876.1	RBM19-004	604	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000552386.1	RBM19-005	692	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 692 bps,

Version

ENST00000552386.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000405255 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000552386.1 RBM19-005

Summary