Transcript: ENST00000545145.2 RBM19-003

Description

RNA binding motif protein 19 [Source:HGNC Symbol;Acc:29098]

Gene Synonyms

DKFZp586F1023, KIAA0682

Location

Chromosome 12: 114,254,547-114,404,111 reverse strand.

About this transcript

This transcript has 25 exons, is annotated with 43 domains and features, is associated with 65979 variant alleles and maps to 719 oligo probes.

Gene

This transcript is a product of gene ENSG00000122965.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000545145.2	RBM19-003	4422	960aa	ENSP00000442053.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9172	Q9Y4C8	NM_001146699.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000261741.5	RBM19-001	4194	960aa	ENSP00000261741.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9172	Q9Y4C8	NM_016196.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392561.3	RBM19-002	3571	960aa	ENSP00000376344.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9172	Q9Y4C8	NM_001146698.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000552384.1	RBM19-006	588	110aa	ENSP00000449604.1	Nonsense mediated decay		H0YIL2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000553232.1	RBM19-007	1265	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000546876.1	RBM19-004	604	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000552386.1	RBM19-005	692	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 25, Coding exons: 24, Transcript length: 4,422 bps, Translation length: 960 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y4C8

CCDS

This transcript is a member of the Human CCDS set: CCDS9172

Version

ENST00000545145.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000405251 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000545145.2 RBM19-003

Summary