Transcript: ENST00000422843.3 ITK-001

Description

IL2-inducible T-cell kinase [Source:HGNC Symbol;Acc:6171]

Gene Synonyms

EMT, LPFS1, LYK, PSCTK2

Location

Chromosome 5: 156,607,837-156,682,201 forward strand.

About this transcript

This transcript has 17 exons, is annotated with 39 domains and features, is associated with 32680 variant alleles and maps to 684 oligo probes.

Gene

This transcript is a product of gene ENSG00000113263.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000422843.3	ITK-001	4528	620aa	ENSP00000398655.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4336	E5RFR5 Q08881 Q7Z318	NM_005546.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000521769.1	ITK-008	571	73aa	ENSP00000430327.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFR5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000517779.1	ITK-007	587	116aa	ENSP00000431054.1	Nonsense mediated decay		E5RJY4	-	-
ENST00000519749.1	ITK-005	3375	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000522616.1	ITK-003	1102	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000519402.1	ITK-002	5869	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000523926.1	ITK-011	996	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000520173.1	ITK-010	831	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000520555.1	ITK-006	606	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000519759.1	ITK-009	540	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 4,528 bps, Translation length: 620 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q08881

CCDS

This transcript is a member of the Human CCDS set: CCDS4336

Version

ENST00000422843.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000252569 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000422843.3 ITK-001

Summary