Transcript: ENST00000542087.1 USP5-003

Description

ubiquitin specific peptidase 5 (isopeptidase T) [Source:HGNC Symbol;Acc:12628]

Gene Synonyms

ISOT, IsoT

Location

Chromosome 12: 6,961,317-6,970,254 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 3 domains and features, is associated with 4052 variant alleles and maps to 99 oligo probes.

Gene

This transcript is a product of gene ENSG00000111667.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000229268.8	USP5-001	3181	858aa	ENSP00000229268.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41743	P45974	NM_001098536.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000389231.5	USP5-002	3083	835aa	ENSP00000373883.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31733	P45974	NM_003481.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542087.1	USP5-003	438	137aa	ENSP00000444668.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H571	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000541969.1	USP5-005	766	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000537267.1	USP5-007	2522	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000542371.1	USP5-006	768	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000535080.1	USP5-004	534	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 438 bps, Translation length: 137 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000542087.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000402984 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000542087.1 USP5-003

Summary