Transcript: ENST00000229268.8 USP5-001

Description

ubiquitin specific peptidase 5 (isopeptidase T) [Source:HGNC Symbol;Acc:12628]

Gene Synonyms

ISOT, IsoT

Location

Chromosome 12: 6,961,292-6,975,793 forward strand.

About this transcript

This transcript has 20 exons, is annotated with 29 domains and features, is associated with 6697 variant alleles and maps to 631 oligo probes.

Gene

This transcript is a product of gene ENSG00000111667.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000229268.8	USP5-001	3181	858aa	ENSP00000229268.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41743	P45974	NM_001098536.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000389231.5	USP5-002	3083	835aa	ENSP00000373883.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31733	P45974	NM_003481.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542087.1	USP5-003	438	137aa	ENSP00000444668.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H571	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000541969.1	USP5-005	766	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000537267.1	USP5-007	2522	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000542371.1	USP5-006	768	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000535080.1	USP5-004	534	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 3,181 bps, Translation length: 858 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P45974

CCDS

This transcript is a member of the Human CCDS set: CCDS41743

Version

ENST00000229268.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000402982 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000229268.8 USP5-001

Summary