Transcript: ENST00000493037.1 RUNDC3B-002

Description

RUN domain containing 3B [Source:HGNC Symbol;Acc:30286]

Gene Synonyms

RPIB9, RPIP9

Location

Chromosome 7: 87,257,770-87,459,771 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 10 domains and features, is associated with 82516 variant alleles and maps to 413 oligo probes.

Gene

This transcript is a product of gene ENSG00000105784.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000338056.3	RUNDC3B-001	4099	473aa	ENSP00000337732.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5609	Q96NL0	NM_138290.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394654.3	RUNDC3B-003	2064	456aa	ENSP00000378149.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47635	B4DEG0 Q96NL0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000493037.1	RUNDC3B-002	2020	407aa	ENSP00000420394.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47636	Q96NL0	NM_001134406.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000496000.1	RUNDC3B-007	592	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489461.1	RUNDC3B-004	583	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466676.1	RUNDC3B-006	582	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497788.1	RUNDC3B-005	431	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000312373.8	RUNDC3B-008	3254	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000476114.1	RUNDC3B-009	764	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,020 bps, Translation length: 407 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96NL0

CCDS

This transcript is a member of the Human CCDS set: CCDS47636

Version

ENST00000493037.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000334890 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000493037.1 RUNDC3B-002

Summary