Transcript: ENST00000466676.1 RUNDC3B-006

Description

RUN domain containing 3B [Source:HGNC Symbol;Acc:30286]

Gene Synonyms

RPIB9, RPIP9

Location

Chromosome 7: 87,256,864-87,370,853 forward strand.

About this transcript

This transcript has 7 exons, is associated with 47080 variant alleles and maps to 180 oligo probes.

Gene

This transcript is a product of gene ENSG00000105784.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000338056.3	RUNDC3B-001	4099	473aa	ENSP00000337732.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5609	Q96NL0	NM_138290.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394654.3	RUNDC3B-003	2064	456aa	ENSP00000378149.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47635	B4DEG0 Q96NL0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000493037.1	RUNDC3B-002	2020	407aa	ENSP00000420394.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47636	Q96NL0	NM_001134406.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000496000.1	RUNDC3B-007	592	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489461.1	RUNDC3B-004	583	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466676.1	RUNDC3B-006	582	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497788.1	RUNDC3B-005	431	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000312373.8	RUNDC3B-008	3254	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000476114.1	RUNDC3B-009	764	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 582 bps,

Version

ENST00000466676.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000337834 (version 1)

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Transcript: ENST00000466676.1 RUNDC3B-006

Summary