Transcript: ENST00000542601.2 COMP-007

Description

cartilage oligomeric matrix protein [Source:HGNC Symbol;Acc:2227]

Gene Synonyms

EDM1, EPD1, MED, PSACH, THBS5

Location

About this transcript

This transcript has 18 exons, is annotated with 52 domains and features, is associated with 5689 variant alleles and maps to 680 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000542601.2	COMP-007	2707	724aa	ENSP00000439156.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3XAP6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000222271.2	COMP-001	2461	757aa	ENSP00000222271.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12385	G3XAP6 P49747	NM_000095.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000425807.1	COMP-005	2292	704aa	ENSP00000403792.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DKJ3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546510.1	COMP-008	585	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 2,707 bps, Translation length: 724 residues

Version

ENST00000542601.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000403456 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.