Transcript: ENST00000222271.2 COMP-001

Description

cartilage oligomeric matrix protein [Source:HGNC Symbol;Acc:2227]

Gene Synonyms

EDM1, EPD1, MED, PSACH, THBS5

Location

About this transcript

This transcript has 19 exons, is annotated with 54 domains and features, is associated with 5701 variant alleles and maps to 566 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000542601.2	COMP-007	2707	724aa	ENSP00000439156.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3XAP6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000222271.2	COMP-001	2461	757aa	ENSP00000222271.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12385	G3XAP6 P49747	NM_000095.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000425807.1	COMP-005	2292	704aa	ENSP00000403792.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DKJ3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546510.1	COMP-008	585	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 2,461 bps, Translation length: 757 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P49747

CCDS

This transcript is a member of the Human CCDS set: CCDS12385

Version

ENST00000222271.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000403457 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.