Transcript: ENST00000489500.1 TNRC6B-005

Description

trinucleotide repeat containing 6B [Source:HGNC Symbol;Acc:29190]

Gene Synonyms

KIAA1093

Location

Chromosome 22: 40,573,929-40,642,366 forward strand.

About this transcript

This transcript has 2 exons, is associated with 29708 variant alleles and maps to 48 oligo probes.

Gene

This transcript is a product of gene ENSG00000100354.16 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000454349.2	TNRC6B-202	18279	1833aa	ENSP00000401946.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54533	Q9UPQ9	NM_001162501.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000335727.9	TNRC6B-002	17933	1723aa	ENSP00000338371.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46713	Q9UPQ9	NM_015088.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000301923.9	TNRC6B-201	15958	1029aa	ENSP00000306759.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46712	B0QYM5 Q9UPQ9	NM_001024843.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000446273.1	TNRC6B-003	4741	1391aa	ENSP00000409429.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E231	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000402203.1	TNRC6B-001	3444	1029aa	ENSP00000384795.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46712	B0QYM5 Q9UPQ9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441751.1	TNRC6B-004	415	37aa	ENSP00000397491.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0QYM5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000497559.1	TNRC6B-006	582	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489500.1	TNRC6B-005	564	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467658.1	TNRC6B-007	496	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 564 bps,

Version

ENST00000489500.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000321397 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000489500.1 TNRC6B-005

Summary