Transcript: ENST00000454349.2 TNRC6B-202

Description

trinucleotide repeat containing 6B [Source:HGNC Symbol;Acc:29190]

Gene Synonyms

KIAA1093

Location

Chromosome 22: 40,573,929-40,731,811 forward strand.

About this transcript

This transcript has 23 exons, is annotated with 27 domains and features, is associated with 70411 variant alleles and maps to 1186 oligo probes.

Gene

This transcript is a product of gene ENSG00000100354.16 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000454349.2	TNRC6B-202	18279	1833aa	ENSP00000401946.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54533	Q9UPQ9	NM_001162501.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000335727.9	TNRC6B-002	17933	1723aa	ENSP00000338371.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46713	Q9UPQ9	NM_015088.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000301923.9	TNRC6B-201	15958	1029aa	ENSP00000306759.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46712	B0QYM5 Q9UPQ9	NM_001024843.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000446273.1	TNRC6B-003	4741	1391aa	ENSP00000409429.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E231	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000402203.1	TNRC6B-001	3444	1029aa	ENSP00000384795.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46712	B0QYM5 Q9UPQ9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441751.1	TNRC6B-004	415	37aa	ENSP00000397491.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0QYM5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000497559.1	TNRC6B-006	582	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489500.1	TNRC6B-005	564	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467658.1	TNRC6B-007	496	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 18,279 bps, Translation length: 1,833 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UPQ9

CCDS

This transcript is a member of the Human CCDS set: CCDS54533

Version

ENST00000454349.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000454349.2 TNRC6B-202

Summary