Transcript: ENST00000406259.1 ARVCF-013

Description

armadillo repeat gene deleted in velocardiofacial syndrome [Source:HGNC Symbol;Acc:728]

Location

Chromosome 22: 19,958,751-19,978,317 reverse strand.

About this transcript

This transcript has 16 exons, is annotated with 26 domains and features, is associated with 10711 variant alleles and maps to 519 oligo probes.

Gene

This transcript is a product of gene ENSG00000099889.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263207.3	ARVCF-001	4041	962aa	ENSP00000263207.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13771	O00192	NM_001670.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000344269.3	ARVCF-201	3558	899aa	ENSP00000342042.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O00192	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000406259.1	ARVCF-013	2871	956aa	ENSP00000385444.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PDC3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000401994.1	ARVCF-011	2700	899aa	ENSP00000384341.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O00192	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000406522.1	ARVCF-012	2682	893aa	ENSP00000384732.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JJX6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000487793.1	ARVCF-005	863	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492625.1	ARVCF-006	631	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480792.1	ARVCF-009	551	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462319.1	ARVCF-007	433	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467828.1	ARVCF-004	258	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495096.1	ARVCF-002	2549	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000473551.1	ARVCF-003	2108	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 2,871 bps, Translation length: 956 residues

Version

ENST00000406259.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000319752 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000406259.1 ARVCF-013

Summary