Transcript: ENST00000263207.3 ARVCF-001

Description

armadillo repeat gene deleted in velocardiofacial syndrome [Source:HGNC Symbol;Acc:728]

Location

Chromosome 22: 19,957,419-20,004,331 reverse strand.

About this transcript

This transcript has 20 exons, is annotated with 25 domains and features, is associated with 23511 variant alleles and maps to 793 oligo probes.

Gene

This transcript is a product of gene ENSG00000099889.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263207.3	ARVCF-001	4041	962aa	ENSP00000263207.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13771	O00192	NM_001670.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000344269.3	ARVCF-201	3558	899aa	ENSP00000342042.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O00192	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000406259.1	ARVCF-013	2871	956aa	ENSP00000385444.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PDC3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000401994.1	ARVCF-011	2700	899aa	ENSP00000384341.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O00192	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000406522.1	ARVCF-012	2682	893aa	ENSP00000384732.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JJX6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000487793.1	ARVCF-005	863	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492625.1	ARVCF-006	631	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480792.1	ARVCF-009	551	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462319.1	ARVCF-007	433	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467828.1	ARVCF-004	258	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495096.1	ARVCF-002	2549	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000473551.1	ARVCF-003	2108	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 20, Coding exons: 17, Transcript length: 4,041 bps, Translation length: 962 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O00192

CCDS

This transcript is a member of the Human CCDS set: CCDS13771

Version

ENST00000263207.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000075314 (version 5)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000263207.3 ARVCF-001

Summary