Transcript: ENST00000497427.1 HLTF-010

Description

helicase-like transcription factor [Source:HGNC Symbol;Acc:11099]

Gene Synonyms

HIP116, HIP116A, HLTF1, RNF80, SMARCA3, SNF2L3, ZBU1

Location

Chromosome 3: 148,757,929-148,759,831 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 744 variant alleles and maps to 101 oligo probes.

Gene

This transcript is a product of gene ENSG00000071794.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000310053.5	HLTF-003	5317	1009aa	ENSP00000308944.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33875	Q14527	NM_139048.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000465259.1	HLTF-002	5306	1008aa	ENSP00000420745.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q14527	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392912.2	HLTF-004	3896	1009aa	ENSP00000376644.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33875	Q14527	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000494055.1	HLTF-001	3633	1009aa	ENSP00000420429.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33875	Q14527	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467858.1	HLTF-007	1276	425aa	ENSP00000420106.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C5K0	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000481663.1	HLTF-005	501	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493881.1	HLTF-006	461	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497427.1	HLTF-010	570	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000472830.1	HLTF-011	533	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 570 bps,

Version

ENST00000497427.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000356149 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000497427.1 HLTF-010

Summary