Transcript: ENST00000465259.1 HLTF-002

Description

helicase-like transcription factor [Source:HGNC Symbol;Acc:11099]

Gene Synonyms

HIP116, HIP116A, HLTF1, RNF80, SMARCA3, SNF2L3, ZBU1

Location

Chromosome 3: 148,747,914-148,804,309 reverse strand.

About this transcript

This transcript has 25 exons, is annotated with 26 domains and features, is associated with 23917 variant alleles and maps to 844 oligo probes.

Gene

This transcript is a product of gene ENSG00000071794.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000310053.5	HLTF-003	5317	1009aa	ENSP00000308944.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33875	Q14527	NM_139048.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000465259.1	HLTF-002	5306	1008aa	ENSP00000420745.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q14527	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392912.2	HLTF-004	3896	1009aa	ENSP00000376644.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33875	Q14527	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000494055.1	HLTF-001	3633	1009aa	ENSP00000420429.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33875	Q14527	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467858.1	HLTF-007	1276	425aa	ENSP00000420106.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C5K0	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000481663.1	HLTF-005	501	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493881.1	HLTF-006	461	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497427.1	HLTF-010	570	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000472830.1	HLTF-011	533	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 25, Coding exons: 25, Transcript length: 5,306 bps, Translation length: 1,008 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q14527

Version

ENST00000465259.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000356063 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000465259.1 HLTF-002

Summary