Transcript: ENST00000515605.1 TNIP3-005

Description

TNFAIP3 interacting protein 3 [Source:HGNC Symbol;Acc:19315]

Gene Synonyms

ABIN-3, ABIN3, FLJ21162, LIND

Location

Chromosome 4: 122,053,692-122,078,438 reverse strand.

About this transcript

This transcript has 7 exons, is associated with 10441 variant alleles and maps to 333 oligo probes.

Gene

This transcript is a product of gene ENSG00000050730.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000454328.1	TNIP3-201	2429	325aa	ENSP00000411817.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3718	Q96KP6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000057513.3	TNIP3-001	2416	325aa	ENSP00000057513.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3718	Q96KP6	NM_024873.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507879.1	TNIP3-004	1778	369aa	ENSP00000427106.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58925	Q96KP6	NM_001128843.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000509841.1	TNIP3-003	1575	376aa	ENSP00000426613.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58926	Q96KP6	NM_001244764.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000515036.1	TNIP3-007	712	86aa	ENSP00000424284.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y9J7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000511909.1	TNIP3-006	722	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000506753.1	TNIP3-002	1001	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000515605.1	TNIP3-005	838	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 838 bps,

Version

ENST00000515605.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000364464 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000515605.1 TNIP3-005

Summary