Transcript: ENST00000507879.1 TNIP3-004

Description

TNFAIP3 interacting protein 3 [Source:HGNC Symbol;Acc:19315]

Gene Synonyms

ABIN-3, ABIN3, FLJ21162, LIND

Location

Chromosome 4: 122,053,195-122,137,782 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 9 domains and features, is associated with 35396 variant alleles and maps to 447 oligo probes.

Gene

This transcript is a product of gene ENSG00000050730.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000454328.1	TNIP3-201	2429	325aa	ENSP00000411817.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3718	Q96KP6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000057513.3	TNIP3-001	2416	325aa	ENSP00000057513.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3718	Q96KP6	NM_024873.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507879.1	TNIP3-004	1778	369aa	ENSP00000427106.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58925	Q96KP6	NM_001128843.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000509841.1	TNIP3-003	1575	376aa	ENSP00000426613.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58926	Q96KP6	NM_001244764.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000515036.1	TNIP3-007	712	86aa	ENSP00000424284.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y9J7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000511909.1	TNIP3-006	722	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000506753.1	TNIP3-002	1001	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000515605.1	TNIP3-005	838	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 1,778 bps, Translation length: 369 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96KP6

CCDS

This transcript is a member of the Human CCDS set: CCDS58925

Version

ENST00000507879.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000364463 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000507879.1 TNIP3-004

Summary