Transcript: ENST00000008527.5 CRY1-001

Description

cryptochrome 1 (photolyase-like) [Source:HGNC Symbol;Acc:2384]

Gene Synonyms

PHLL1

Location

About this transcript

This transcript has 13 exons, is annotated with 12 domains and features, is associated with 43119 variant alleles and maps to 511 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000008527.5	CRY1-001	3267	586aa	ENSP00000008527.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9112	A2I2P0 H0YHT0 Q16526	NM_004075.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000549356.1	CRY1-004	621	106aa	ENSP00000447738.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YHT0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000550633.1	CRY1-003	830	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000552790.1	CRY1-002	3834	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000546722.1	CRY1-005	471	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 3,267 bps, Translation length: 586 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q16526

CCDS

This transcript is a member of the Human CCDS set: CCDS9112

Version

ENST00000008527.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000406827 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.