Transcript: ENST00000534803.1 PAMR1-004

Description

peptidase domain containing associated with muscle regeneration 1 [Source:HGNC Symbol;Acc:24554]

Gene Synonyms

DKFZP586H2123, RAMP

Location

Chromosome 11: 35,473,436-35,547,145 reverse strand.

About this transcript

This transcript has 8 exons, is associated with 30160 variant alleles and maps to 194 oligo probes.

Gene

This transcript is a product of gene ENSG00000149090.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000278360.3	PAMR1-002	2786	737aa	ENSP00000278360.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7898	E9PQ70 Q6UXH9	NM_015430.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378880.2	PAMR1-001	3143	720aa	ENSP00000368158.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31460	E9PIV1 Q6UXH9	NM_001001991.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000532848.1	PAMR1-003	2843	680aa	ENSP00000433868.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60759	E9PIV1	NM_001282675.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000527605.1	PAMR1-005	2402	675aa	ENSP00000432591.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PQ70	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000378878.3	PAMR1-201	2374	609aa	ENSP00000368156.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60760	A8MQ58 E9PMN5	NM_001282676.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529303.1	PAMR1-007	551	177aa	ENSP00000433024.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PMN5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000534803.1	PAMR1-004	952	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000531219.1	PAMR1-006	560	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 0, Transcript length: 952 bps,

Version

ENST00000534803.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000389182 (version 1)

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Transcript: ENST00000534803.1 PAMR1-004

Summary