Transcript: ENST00000485337.1 GOLGA1-002

Description

golgin A1 [Source:HGNC Symbol;Acc:4424]

Gene Synonyms

MGC33154, golgin-97

Location

Chromosome 9: 127,651,458-127,684,060 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 5 domains and features, is associated with 14405 variant alleles and maps to 189 oligo probes.

Gene

This transcript is a product of gene ENSG00000136935.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000373555.4	GOLGA1-001	4801	767aa	ENSP00000362656.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6860	Q5T165 Q92805	NM_002077.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000421514.1	GOLGA1-005	589	112aa	ENSP00000396966.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T165	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000475407.1	GOLGA1-003	4107	168aa	ENSP00000473648.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000485337.1	GOLGA1-002	935	151aa	ENSP00000435006.1	Nonsense mediated decay		H0YE54	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000605438.1	GOLGA1-009	886	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000373551.4	GOLGA1-004	522	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 6, Transcript length: 935 bps, Translation length: 151 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000485337.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000054050 (version 3)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000485337.1 GOLGA1-002

Summary