Transcript: ENST00000546876.1 RBM19-004

Description

RNA binding motif protein 19 [Source:HGNC Symbol;Acc:29098]

Gene Synonyms

DKFZp586F1023, KIAA0682

Location

Chromosome 12: 114,395,668-114,404,014 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 3758 variant alleles and maps to 116 oligo probes.

Gene

This transcript is a product of gene ENSG00000122965.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000545145.2	RBM19-003	4422	960aa	ENSP00000442053.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9172	Q9Y4C8	NM_001146699.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000261741.5	RBM19-001	4194	960aa	ENSP00000261741.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9172	Q9Y4C8	NM_016196.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392561.3	RBM19-002	3571	960aa	ENSP00000376344.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9172	Q9Y4C8	NM_001146698.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000552384.1	RBM19-006	588	110aa	ENSP00000449604.1	Nonsense mediated decay		H0YIL2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000553232.1	RBM19-007	1265	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000546876.1	RBM19-004	604	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000552386.1	RBM19-005	692	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 604 bps,

Version

ENST00000546876.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000405256 (version 1)

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Transcript: ENST00000546876.1 RBM19-004

Summary