Transcript: ENST00000541969.1 USP5-005

Description

ubiquitin specific peptidase 5 (isopeptidase T) [Source:HGNC Symbol;Acc:12628]

Gene Synonyms

ISOT, IsoT

Location

Chromosome 12: 6,969,628-6,973,080 forward strand.

About this transcript

This transcript has 6 exons, is associated with 1524 variant alleles and maps to 208 oligo probes.

Gene

This transcript is a product of gene ENSG00000111667.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000229268.8	USP5-001	3181	858aa	ENSP00000229268.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41743	P45974	NM_001098536.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000389231.5	USP5-002	3083	835aa	ENSP00000373883.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31733	P45974	NM_003481.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542087.1	USP5-003	438	137aa	ENSP00000444668.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H571	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000541969.1	USP5-005	766	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000537267.1	USP5-007	2522	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000542371.1	USP5-006	768	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000535080.1	USP5-004	534	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 766 bps,

Version

ENST00000541969.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000402987 (version 1)

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Transcript: ENST00000541969.1 USP5-005

Summary