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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ABCE1 ENSG00000164163

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Description

ATP-binding cassette, sub-family E (OABP), member 1 [Source:HGNC Symbol;Acc:69]

Gene Synonyms

ABC38, OABP, RLI, RNASEL1, RNASELI, RNS4I

Location

Chromosome 4: 146,019,084-146,050,331 forward strand.

GRCh37:CM000666.1

About this gene

This gene has 10 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000296577.4	ABCE1-001	3921	599aa	ENSP00000296577.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34071	D6R9I9 D6RGF4 P61221	NM_002940.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000502586.1	ABCE1-004	786	210aa	ENSP00000421250.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RGF4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000507193.1	ABCE1-010	2146	421aa	ENSP00000422068.1	Nonsense mediated decay		D6R9I9 D6RGF4	-	-
ENST00000504292.1	ABCE1-005	625	147aa	ENSP00000423415.1	Nonsense mediated decay		H0Y990	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000502803.1	ABCE1-006	782	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000506506.1	ABCE1-003	421	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000510321.1	ABCE1-002	2529	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000504683.1	ABCE1-007	759	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000515678.1	ABCE1-008	750	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000509593.1	ABCE1-009	582	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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