Transcript: ENST00000296577.4 ABCE1-001

Description

ATP-binding cassette, sub-family E (OABP), member 1 [Source:HGNC Symbol;Acc:69]

Gene Synonyms

ABC38, OABP, RLI, RNASEL1, RNASELI, RNS4I

Location

Chromosome 4: 146,019,084-146,050,331 forward strand.

About this transcript

This transcript has 18 exons, is annotated with 27 domains and features, is associated with 13053 variant alleles and maps to 754 oligo probes.

Gene

This transcript is a product of gene ENSG00000164163.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000296577.4	ABCE1-001	3921	599aa	ENSP00000296577.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34071	D6R9I9 D6RGF4 P61221	NM_002940.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000502586.1	ABCE1-004	786	210aa	ENSP00000421250.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RGF4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000507193.1	ABCE1-010	2146	421aa	ENSP00000422068.1	Nonsense mediated decay		D6R9I9 D6RGF4	-	-
ENST00000504292.1	ABCE1-005	625	147aa	ENSP00000423415.1	Nonsense mediated decay		H0Y990	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000502803.1	ABCE1-006	782	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000506506.1	ABCE1-003	421	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000510321.1	ABCE1-002	2529	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000504683.1	ABCE1-007	759	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000515678.1	ABCE1-008	750	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000509593.1	ABCE1-009	582	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 18, Coding exons: 17, Transcript length: 3,921 bps, Translation length: 599 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P61221

CCDS

This transcript is a member of the Human CCDS set: CCDS34071

Version

ENST00000296577.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000365104 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000296577.4 ABCE1-001

Summary