Gene: SHANK1 ENSG00000161681

Description

SH3 and multiple ankyrin repeat domains 1 [Source:HGNC Symbol;Acc:15474]

Gene Synonyms

SPANK-1, SSTRIP, synamon

Location

Chromosome 19: 51,165,084-51,222,707 reverse strand.

GRCh37:CM000681.1

About this gene

This gene has 8 transcripts (splice variants), 2 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000293441.1	SHANK1-001	6643	2161aa	ENSP00000293441.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12799	Q9Y566	NM_016148.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000391814.1	SHANK1-002	6622	2169aa	ENSP00000375690.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H9KV90	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000359082.3	SHANK1-008	6459	2152aa	ENSP00000351984.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9Y566	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000391813.1	SHANK1-003	4785	1548aa	ENSP00000375689.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9Y566	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000468654.1	SHANK1-006	668	183aa	ENSP00000469719.1	Nonsense mediated decay		M0QYB5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000483981.2	SHANK1-007	422	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483128.1	SHANK1-004	780	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461154.1	SHANK1-005	558	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Gene: SHANK1 ENSG00000161681

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Gene: SHANK1 ENSG00000161681

Summary