Loading…

Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: FAM71F1 ENSG00000135248

.

Description

family with sequence similarity 71, member F1 [Source:HGNC Symbol;Acc:30704]

Gene Synonyms

FAM137A, NYD-SP18

Location

Chromosome 7: 128,349,115-128,371,797 forward strand.

GRCh37:CM000669.1

About this gene

This gene has 8 transcripts (splice variants) and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000315184.5	FAM71F1-002	1718	344aa	ENSP00000326652.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5804	H7C4R1 Q96KD3	NM_032599.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000485070.1	FAM71F1-001	1574	243aa	ENSP00000418192.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS64763	Q8NA48	NM_001282789.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000466842.1	FAM71F1-008	404	134aa	ENSP00000417930.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C4R1	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000484425.2	FAM71F1-003	1818	143aa	ENSP00000418591.2	Nonsense mediated decay		F8WC78	-	-
ENST00000471558.1	FAM71F1-006	1201	286aa	ENSP00000418672.1	Nonsense mediated decay		F8WC62	-	-
ENST00000469348.1	FAM71F1-005	867	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483459.1	FAM71F1-007	662	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493738.1	FAM71F1-004	873	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

.

Summary

.

.