Description
stromal antigen 3 [Source:HGNC Symbol;Acc:11356]
Location
Chromosome 7: 99,775,186-99,819,111 forward strand.
GRCh37:CM000669.1
About this gene
This gene has 17 transcripts (splice variants), 2 paralogues and is associated with 1 phenotype.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000426455.1 | STAG3-004 | 4450 | 1225aa | ENSP00000400359.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS34703 | B4DYS8 C9JTG4 C9JYW5 D6W5U7 Q9UJ98 | NM_001282716.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000317296.5 | STAG3-001 | 4198 | 1225aa | ENSP00000319318.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS34703 | B4DYS8 C9JTG4 C9JYW5 D6W5U7 Q9UJ98 | NM_012447.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000394018.2 | STAG3-003 | 4163 | 1167aa | ENSP00000377586.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS64730 | C9J3T3 C9JYW5 H7BYK9 | NM_001282718.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000412190.1 | STAG3-022 | 920 | 184aa | ENSP00000395039.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7C0H6 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000439782.1 | STAG3-010 | 699 | 188aa | ENSP00000397067.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J3T3 C9JYW5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000416412.1 | STAG3-012 | 605 | 144aa | ENSP00000409283.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JTG4 C9JYW5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000422690.1 | STAG3-009 | 534 | 112aa | ENSP00000407884.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JYW5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000451963.1 | STAG3-023 | 3056 | 172aa | ENSP00000393790.1 | Nonsense mediated decay | H0Y4S6 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000440830.1 | STAG3-006 | 3121 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000491498.1 | STAG3-020 | 3031 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000459699.1 | STAG3-013 | 535 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000496157.1 | STAG3-002 | 3585 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000479359.1 | STAG3-017 | 780 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000477469.1 | STAG3-016 | 719 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000492674.1 | STAG3-018 | 666 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000476057.1 | STAG3-021 | 583 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000482546.1 | STAG3-011 | 472 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
