Description
protein tyrosine phosphatase, receptor type, U [Source:HGNC Symbol;Acc:9683]
Gene Synonyms
FMI, PCP-2, PCP2, PTP, PTP-J, PTP-PI, PTP-RO, PTPPSI, PTPRO, PTPU2, R-PTP-PSI, R-PTP-U, hPTP-J
Location
Chromosome 1: 29,563,028-29,653,325 forward strand.
GRCh37:CM000663.1
About this gene
This gene has 13 transcripts (splice variants) and 11 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000345512.3 | PTPRU-003 | 4470 | 1446aa | ENSP00000334941.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS334 | B3KT29 Q92729 | NM_005704.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000373779.3 | PTPRU-001 | 5579 | 1436aa | ENSP00000362884.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS335 | B3KT29 Q92729 | NM_133178.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000356870.3 | PTPRU-202 | 5579 | 1442aa | ENSP00000349333.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3KT29 E9PH42 | NM_133177.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000323874.8 | PTPRU-201 | 5579 | 1442aa | ENSP00000314987.8 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3KT29 F8W7J5 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000428026.2 | PTPRU-008 | 5550 | 1433aa | ENSP00000392332.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS53290 | B3KT29 Q92729 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000460170.2 | PTPRU-002 | 5337 | 1440aa | ENSP00000432906.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44098 | Q92729 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000415600.2 | PTPRU-006 | 1590 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000493601.1 | PTPRU-007 | 695 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000527027.1 | PTPRU-009 | 619 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000465525.2 | PTPRU-004 | 1650 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000531385.1 | PTPRU-010 | 737 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000492954.1 | PTPRU-005 | 625 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000526080.1 | PTPRU-011 | 424 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
