Description
RanBP-type and C3HC4-type zinc finger containing 1 [Source:HGNC Symbol;Acc:15864]
Gene Synonyms
C20orf18, HOIL-1, HOIL1, RBCK2, RNF54, UBCE7IP3, XAP3, XAP4, ZRANB4
Location
Chromosome 20: 388,142-411,610 forward strand.
GRCh37:CM000682.1
About this gene
This gene has 13 transcripts (splice variants), 1 paralogue and is associated with 2 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000356286.5 | RBCK1-010 | 2774 | 510aa | ENSP00000348632.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS13000 | Q5JWR1 Q9BYM8 | NM_031229.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000353660.3 | RBCK1-009 | 2511 | 468aa | ENSP00000254960.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12998 | Q9BYM8 | NM_006462.4 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000382181.2 | RBCK1-006 | 2208 | 340aa | ENSP00000371616.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6PVK0 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000475269.1 | RBCK1-001 | 1200 | 105aa | ENSP00000417173.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6PVJ6 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000441733.1 | RBCK1-013 | 961 | 116aa | ENSP00000387799.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6PVJ7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000400247.3 | RBCK1-002 | 790 | 63aa | ENSP00000383106.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6PVJ5 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000414880.1 | RBCK1-007 | 765 | 255aa | ENSP00000393841.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000411647.1 | RBCK1-004 | 593 | 117aa | ENSP00000415080.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5JWR1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000382214.3 | RBCK1-005 | 2752 | 336aa | ENSP00000371649.3 | Nonsense mediated decay | G3XAG9 Q5JWR1 | - | - | |
| ENST00000415942.1 | RBCK1-011 | 2613 | 272aa | ENSP00000405288.1 | Nonsense mediated decay | B4DML5 Q5JWR1 | - | - | |
| ENST00000400245.3 | RBCK1-003 | 1024 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000465226.1 | RBCK1-012 | 372 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000468272.1 | RBCK1-008 | 1486 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
