Transcript: ENST00000539976.1 MC1R-003

Description

melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor) [Source:HGNC Symbol;Acc:6929]

Gene Synonyms

CMM5, MSH-R, MSHR, SHEP2

Location

About this transcript

This transcript has 2 exons, is associated with 3307 variant alleles and maps to 223 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000555427.1	MC1R-002	3637	382aa	ENSP00000451760.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V4F0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555147.1	MC1R-001	3099	317aa	ENSP00000451605.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56011	Q01726 Q1JUL4	NM_002386.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539976.1	MC1R-003	2464	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 2,464 bps,

Version

ENST00000539976.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000400057 (version 1)