Transcript: ENST00000545109.1 PGA5-002

Description

pepsinogen 5, group I (pepsinogen A) [Source:HGNC Symbol;Acc:8887]

Gene Synonyms

PGA3, PGA4

Location

About this transcript

This transcript has 2 exons, is associated with 9 variant alleles and maps to 157 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000312403.5	PGA5-001	1519	388aa	ENSP00000309542.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8001	F5GWT0 P0DJD9	NM_014224.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000451616.2	PGA5-006	971	234aa	ENSP00000408739.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JM59 F5GWT0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541528.1	PGA5-005	867	128aa	ENSP00000441981.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GWT0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545109.1	PGA5-002	592	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000536269.1	PGA5-003	576	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000535568.1	PGA5-004	572	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 592 bps,

Version

ENST00000545109.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000397973 (version 2)