Transcript: ENST00000539300.1 KLRC4-KLRK1-002

Description

KLRC4-KLRK1 readthrough [Source:HGNC Symbol;Acc:48357]

Gene Synonyms

CD314, D12S2489E, KLR, NKG2-D, NKG2D

Location

Chromosome 12: 10,525,505-10,562,148 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 5 domains and features, is associated with 14974 variant alleles and maps to 632 oligo probes.

Gene

This transcript is a product of gene ENSG00000255819.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000543572.2	KLRC4-KLRK1-003	1750	37aa	ENSP00000456286.1	Nonsense mediated decay	H3BRK7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000539300.1	KLRC4-KLRK1-002	1507	150aa	ENSP00000455951.1	Nonsense mediated decay	H3BRK7 H3BU71	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000543812.1	KLRC4-KLRK1-005	1309	75aa	ENSP00000457500.1	Nonsense mediated decay	H3BRK7 H3BU71	-	-
ENST00000586581.1	KLRC4-KLRK1-008	1239	150aa	ENSP00000467228.1	Nonsense mediated decay	H3BRK7 H3BU71	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000590323.1	KLRC4-KLRK1-012	1086	75aa	ENSP00000467880.1	Nonsense mediated decay	H3BRK7 H3BU71	-	-
ENST00000590131.1	KLRC4-KLRK1-011	1085	75aa	ENSP00000467152.1	Nonsense mediated decay	H3BRK7 H3BU71	-	-
ENST00000588447.1	KLRC4-KLRK1-004	1074	75aa	ENSP00000465254.1	Nonsense mediated decay	H3BRK7 H3BU71	-	-
ENST00000588263.1	KLRC4-KLRK1-010	1025	75aa	ENSP00000468074.1	Nonsense mediated decay	H3BRK7 H3BU71	-	-
ENST00000585711.1	KLRC4-KLRK1-013	996	35aa	ENSP00000467316.1	Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000591546.1	KLRC4-KLRK1-007	985	75aa	ENSP00000468432.1	Nonsense mediated decay	H3BRK7 H3BU71	-	-
ENST00000585507.1	KLRC4-KLRK1-006	944	75aa	ENSP00000465434.1	Nonsense mediated decay	H3BRK7 H3BU71	-	-
ENST00000591937.1	KLRC4-KLRK1-009	910	75aa	ENSP00000466326.1	Nonsense mediated decay	H3BRK7 H3BU71	-	-
ENST00000539370.1	KLRC4-KLRK1-001	1108	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 13, Coding exons: 4, Transcript length: 1,507 bps, Translation length: 150 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000539300.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000400267 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000539300.1 KLRC4-KLRK1-002

Summary