Transcript: ENST00000515683.1 ADH1C-001

Description

alcohol dehydrogenase 1C (class I), gamma polypeptide [Source:HGNC Symbol;Acc:251]

Gene Synonyms

ADH3

Location

Chromosome 4: 100,257,649-100,274,184 reverse strand.

About this transcript

This transcript has 9 exons, is associated with 7757 variant alleles and maps to 575 oligo probes.

Gene

This transcript is a product of gene ENSG00000248144.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq	Flags
ENST00000515683.1	ADH1C-001	1740	375aa	ENSP00000426083.1	Pseudogene owing to a SNP/indel but in other individuals/haplotypes/strains the gene is translated.Polymorphic pseudogene	NM_000669.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510055.1	ADH1C-004	872	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENST00000511397.1	ADH1C-002	581	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENST00000505942.1	ADH1C-003	564	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,740 bps, Translation length: 375 residues

Version

ENST00000515683.1

Type

Polymorphic pseudogene

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Stop codons

This transcript has a variant, rs283413, that causes a stop codon to be lost in at least 10% of HapMap or 1000 Genome population(s) CSHL-HAPMAP:HapMap-CEU, CSHL-HAPMAP:HAPMAP-CHB, ESP6500:African_American, CSHL-HAPMAP:HAPMAP-TSI, CSHL-HAPMAP:HAPMAP-GIH, CSHL-HAPMAP:HapMap-HCB, CSHL-HAPMAP:HAPMAP-MEX, CSHL-HAPMAP:HapMap-YRI, CSHL-HAPMAP:HAPMAP-MKK, CSHL-HAPMAP:HapMap-JPT, ESP6500:European_American.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000364877 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000515683.1 ADH1C-001

Summary