Transcript: ENST00000374436.3 EIF6-002

Description

eukaryotic translation initiation factor 6 [Source:HGNC Symbol;Acc:6159]

Gene Synonyms

CAB, EIF3A, ITGB4BP, b(2)gcn, eIF-6, p27(BBP), p27BBP

Location

Chromosome 20: 33,866,714-33,872,518 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 9 domains and features, is associated with 2839 variant alleles and maps to 405 oligo probes.

Gene

This transcript is a product of gene ENSG00000242372.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000374450.3	EIF6-001	1289	245aa	ENSP00000363574.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13249	B7ZBH1 P56537	NM_002212.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374436.3	EIF6-002	1252	245aa	ENSP00000363559.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13249	B7ZBH1 P56537	NM_181468.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374443.3	EIF6-005	1017	226aa	ENSP00000363566.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13250	P56537	NM_181466.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456600.1	EIF6-008	551	108aa	ENSP00000390897.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZBH1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000447927.2	EIF6-003	932	108aa	ENSP00000411450.2	Nonsense mediated decay		-	-	-
ENST00000440766.1	EIF6-007	798	59aa	ENSP00000395907.1	Nonsense mediated decay		F8WD20	-	-
ENST00000415116.1	EIF6-004	739	186aa	ENSP00000415044.1	Nonsense mediated decay		F8WDS6	-	-
ENST00000462894.1	EIF6-006	453	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,252 bps, Translation length: 245 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P56537

CCDS

This transcript is a member of the Human CCDS set: CCDS13249

Version

ENST00000374436.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000125658 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000374436.3 EIF6-002

Summary