Transcript: ENST00000496561.2 ANKRD18B-007

Description

ankyrin repeat domain 18B [Source:HGNC Symbol;Acc:23644]

Gene Synonyms

bA255A11.3, bA255A11.5

Location

Chromosome 9: 33,528,630-33,533,845 forward strand.

About this transcript

This transcript has 2 exons, is associated with 2277 variant alleles and maps to 158 oligo probes.

Gene

This transcript is a product of gene ENSG00000230453.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000290943.6	ANKRD18B-002	3773	1011aa	ENSP00000290943.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2A2Z9	NM_001244752.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357927.3	ANKRD18B-003	2898	401aa	ENSP00000350607.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2A300	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000465094.2	ANKRD18B-006	668	160aa	ENSP00000473566.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	R4GNB3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000605687.1	ANKRD18B-008	223	75aa	ENSP00000474332.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000426460.2	ANKRD18B-005	558	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000484634.1	ANKRD18B-001	536	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000474881.2	ANKRD18B-004	420	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000496561.2	ANKRD18B-007	619	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 619 bps,

Version

ENST00000496561.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000314916 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000496561.2 ANKRD18B-007

Summary