Transcript: ENST00000572991.1 ARL17B-005

Description

ADP-ribosylation factor-like 17B [Source:HGNC Symbol;Acc:32387]

Gene Synonyms

ARF1P2, ARL17, ARL17A, ARL17P1

Location

Chromosome 17: 44,386,873-44,430,248 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 2 domains and features, is associated with 10913 variant alleles and maps to 595 oligo probes.

Gene

This transcript is a product of gene ENSG00000228696.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000570618.1	ARL17B-001	1140	125aa	ENSP00000459151.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54137	Q8IVW1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434041.2	ARL17B-003	798	125aa	ENSP00000391751.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54137	Q8IVW1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000450673.3	ARL17B-002	743	177aa	ENSP00000404247.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58557	Q8IVW1	NM_001039083.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000575960.1	ARL17B-008	731	181aa	ENSP00000460539.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L3L1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000575698.1	ARL17B-007	581	95aa	ENSP00000459131.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L1V5 I3L2E4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000571246.1	ARL17B-006	491	87aa	ENSP00000459773.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L2E4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000572991.1	ARL17B-005	2197	111aa	ENSP00000458681.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 2,197 bps, Translation length: 111 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000572991.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000440293 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000572991.1 ARL17B-005

Summary