Transcript: ENST00000436044.2 VPS52-201

Description

vacuolar protein sorting 52 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:10518]

Gene Synonyms

ARE1, RP5-1033B10, SAC2, SACM2L, dJ1033B10.5

Location

Chromosome 6: 33,218,381-33,239,717 reverse strand.

About this transcript

This transcript has 20 exons, is annotated with 3 domains and features, is associated with 9273 variant alleles and maps to 2251 oligo probes.

Gene

This transcript is a product of gene ENSG00000223501.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000482399.1	VPS52-007	3338	88aa	ENSP00000436612.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PI03	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000445902.2	VPS52-001	2960	723aa	ENSP00000409952.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4770	B4DNI9 B4DS44 Q8N1B4	NM_022553.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000436044.2	VPS52-201	2355	598aa	ENSP00000395282.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DNI9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000478934.1	VPS52-002	2602	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464425.1	VPS52-004	1060	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463486.1	VPS52-005	925	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493674.1	VPS52-011	878	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495981.1	VPS52-010	743	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471309.1	VPS52-006	505	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493379.1	VPS52-003	786	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461743.1	VPS52-009	547	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000495755.1	VPS52-008	453	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 20, Coding exons: 15, Transcript length: 2,355 bps, Translation length: 598 residues

Version

ENST00000436044.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000436044.2 VPS52-201

Summary