Transcript: ENST00000359827.3 PLXNA4-001

Description

plexin A4 [Source:HGNC Symbol;Acc:9102]

Gene Synonyms

DKFZp434G0625PRO34003, FAYV2820, KIAA1550, PLEXA4, PLXNA4A, PLXNA4B, PRO34003

Location

About this transcript

This transcript has 32 exons, is annotated with 41 domains and features, is associated with 209308 variant alleles and maps to 1085 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000359827.3	PLXNA4-001	13786	1894aa	ENSP00000352882.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43646	Q9HCM2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000321063.4	PLXNA4-201	13061	1894aa	ENSP00000323194.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43646	Q9HCM2	NM_020911.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423507.2	PLXNA4-004	3314	492aa	ENSP00000392772.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43647	Q9HCM2	NM_001105543.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378539.5	PLXNA4-002	2004	522aa	ENSP00000367800.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5826	A4D1N6	NM_181775.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000496550.1	PLXNA4-005	597	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 32, Coding exons: 31, Transcript length: 13,786 bps, Translation length: 1,894 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9HCM2

CCDS

This transcript is a member of the Human CCDS set: CCDS43646

Version

ENST00000359827.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000338422 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.